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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917712.1_cds_XP_016467238.1_60003
CDS Infomation

[gene=LOC107789878] [db_xref=GeneID:107789878] [protein=phosphatidylinositol:ceramide inositolphosphotransferase 1-like isoform X2] [protein_id=XP_016467238.1] [location=join(4027..4059,4136..4225,5426..5512,5604..5672,6057..6137,6341..6412,6503..6563,6653..6755,7180..7275,7362..7408,7545..7631,7748..7755)] [gbkey=CDS]
Sequence

ATGTCGCTTTATATTGGTCGTGAGGCTTCAAAGCTGTGGAAGAGAGTTTGTTCGGAGACA
ACAACGGAGATCAATCTTCTTGCTGAAAATTGGAAATATATTCTTGGTGGCTTAATATTC
CAGTACATCCATGGACTTGCGGCTCGAGGGGTTCATTACATACATCGGCCTGGACCAACT
CTTCAGGACGCCGGGTTCTTTCTTCTTCCAGAGCTTGGGTCAGACAAAGCTTACATAAGT
GAAACTGTATTCACCAGTATTTTTCTATCTTTCGTCTTGTGGACATTCCATCCTTTTATT
TTCAAGACCAAAAAGATCTATACTGTTCTGATATGGTGCAGGGTCCTGGCATTCTTAGTT
GCTTGTCAATTTCTTCGGATCATAACATTCTATTCTACACAGCTTCCTGGTCCAAATTAT
CACTGCCGCGAGGGTTCAAAGCTTGCCACACTTCCTCGGCCTAATAGTGTTTTAGAAGTT
TTCCTAATTAATTTTCCCAGGGGTGTACTTTATGGTTGTGGTGATTTGATATTTTCATCA
CATATGATATTCTCTTTAGTCTTTGTGCGGACGTATCATAAATATGGCACGCGAAGGTTT
ATAAAGCAATGTGTTTGGTTAGCTGTTATTGCTCAGAGCTTTTTGATTGTTGCATCACGT
AAACATTACACAGTTGATGTTATTGTGGCATGGTATACTGTTAATCTAGTAGTGTTCTTC
ATTGACAAAAAGTTACCAGAATTGGCGGACCGTACTAGTGCAGCCTTGTTGCTACCCTTA
AGCAAGGATAGCAAGACTAAAGAAGAGAATCACAAACTTCTGAACGAGGCCTAG

Peptide Sequence

PEP ID

XP_016467238.1
PEP Infomation

PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1-like isoform X2 [Nicotiana tabacum]
Sequence

MSLYIGREASKLWKRVCSETTTEINLLAENWKYILGGLIFQYIHGLAARGVHYIHRPGPT
LQDAGFFLLPELGSDKAYISETVFTSIFLSFVLWTFHPFIFKTKKIYTVLIWCRVLAFLV
ACQFLRIITFYSTQLPGPNYHCREGSKLATLPRPNSVLEVFLINFPRGVLYGCGDLIFSS
HMIFSLVFVRTYHKYGTRRFIKQCVWLAVIAQSFLIVASRKHYTVDVIVAWYTVNLVVFF
IDKKLPELADRTSAALLLPLSKDSKTKEENHKLLNEA

Transcript Sequence

Gene sequence data has not been registered.